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Protein coding genes in the C. canephora genome were automatically annotated using various sources of evidence (cDNAs, RNA-Seq, protein alignments, and ab initio predictions) that were combined into gene models. We obtained 25,574 protein-coding gene models.

Download:

• Gene structural and functional annotation (GFF3 file)
• Gene sequences (FASTA file)
• CDS sequences (FASTA file)
• CDS+UTR sequences (FASTA file)
• Peptide sequences (FASTA file)
• TE annotation, REPET 3 iterations (GFF3 file)

Complete Assembly:

• Pseudomolecules (GFF3 file)
• Pseudomolecules (FASTA file)
• Pseudomolecules (AGP file)

• Chromosome 1 (FASTA file)
• Chromosome 2 (FASTA file)
• Chromosome 3 (FASTA file)
• Chromosome 4 (FASTA file)
• Chromosome 5 (FASTA file)
• Chromosome 6 (FASTA file)
• Chromosome 7 (FASTA file)
• Chromosome 8 (FASTA file)
• Chromosome 9 (FASTA file)
• Chromosome 10 (FASTA file)
• Chromosome 11 (FASTA file)
• Chromosome Un (FASTA file)

• Arabica chloroplast genome (FASTA file)
• Arabica chloroplast genome annotation (GFF file)
• Arabica chloroplast genes (FASTA file)